CDS

Accession Number TCMCG006C73299
gbkey CDS
Protein Id XP_013702353.1
Location complement(join(13327..13520,13590..13824,13891..14390,14485..14797,14897..14989,15065..15150,15249..15304,15392..15630,15698..15783,15908..15956,16033..16099,16211..16326,16416..16482,16607..16695,16758..16910))
Gene LOC106406275
GeneID 106406275
Organism Brassica napus

Protein

Length 780aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013846899.2
Definition tRNA (cytosine(34)-C(5))-methyltransferase-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K15334        [VIEW IN KEGG]
EC 2.1.1.202        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000049        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008175        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016427        [VIEW IN EMBL-EBI]
GO:0016428        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0030488        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAGAGGAAGACAGAGAGGTCGTTCTCAGAGAAAACATTTCAAAGAGAGCAGAGAGAATGTCTGGAAACGCCCCAAATCCGATGCTCCCGACAAACCCACCTGGGAGCCTTTCTTGACCGATAACCCTAACTTCGAGGAGTATTACAAGGAACAAGGGATAGTGAAAGCAGAAGAGTGGGATCTGTTCATGGAGATTCTTCGTAAGCCTTTGCCCGCTGCCTTTAGGGTTAACTCCAACAGCCAGTTTTGCGATGAGATTATATCCATATTGGAGAATGACTTTGTGAAATCTCTTCAGGCTGAGGCCATAGAAGGTGGTGAGCTGGAGGCTATTAAGCCCTTGCCTTGGTATCCTAAGAATCTCGCTTGGCATTCCAATTTTTCCCGCAAGGAGATTAGGAAAAATAAGATACTCGAGAGGTTTCATGAATTTCTGAAATTGGAAAATGAAGTTGGAAACATGACTAGACAGGAAGCTGTTAGCATGGTGCCTCCTCTTTTCCTCGACGTACATCCAGATCATTTTGTGCTTGACATGTGTGCTGCACCGGGTTCCAAAACATTTCAGCTGCTCGAGATTATACATGGAGCATCAGAACCAGGAACTCTACCTAATGGAATGGTGGTGGCTAACGATGTTGATTTCCAAAGATCTAACCTTCTTATTCACCAAACAAAGAGAATGTGCACCGCAAACTTGATAGTGACTAATCATGAAGGGCAACAGTTCCCCGGTTGTCGCTTGAAAGGACTAAGTGAAGATATGCCCATTAATCAACTTTCCTTTGACCGTGTTCTGTGTGATGTTCCGTGCAGTGGTGATGGTACCCTGCGCAAAGCTCCAGACATCTGGCGGAAATGGAATTCTGGAATGGGCAATGGACTCCATAGCCTACAGGTTATCCTTGCTATGAGGGGTTTATCGCTGTTGAAAGTTGGTGGGAAAATGATATACTCAACCTGCTCAATGAACCCAGTTGAGGATGAAGCTGTTGTCGCTGAGATTCTAAGGAGGTGTGGAGACTCTGTTGAACTTGTAGATGTTTCTGATAAGCTTCCTGAACTCATACGGAGGCCAGGTCTCAAGACATGGAAGGTGCGTGATAAAGGTGGGTGGTTTACTTCTTACAAAGACGTTCCTCAAAACCGAAGAGGAGGAGTCATTGTGAGCATGTTTCCTTCTGGGAAAAACCTCAAGGACTCAACCGAAACAACTCAGGAGAATGAGAATGGTGGTGTTCAAGATGAGTGCAAGGAAACAGAGAACTCTGTGGTGGATGCTATTCCTGATGAACCAGTCGTTGAAGTCTCTGATCTTCCACTTGAACGTTGCATGAGGATAGTGCCTCATGATCAGAACACCGGAGCCTTTTTCATCGCGGTCCTTCACAAAGTTTCACCACTGCCAGAATTTCAGGAGAAACCAAATCCAAGAAAGCACTCATCTAAGAAAAATGCTGACTCGACAGAAAAGTCTCCGGCTGAAGAAGCTGTTGTCAGTGCTAATACTGAACCAGTAGAGGAAGAAGATGCAAACAATGAGAAGGATGATGATAGCTTGGAGCCTGAGAAGCAAACCACACAGGGAGAAACCACCATCACTGAAGAGAAAGAAGCCAATCCACCGAGTCAAGCGGGAGGCAAGAGAAAAGTACCGATGCAAGGGAGGTGGAAAGGCTTCGACCCTGTTGTTTTCCTGAAAGAGGAGACGTTAATCGATAGCATCAAAGAGTTTTACGGTATCAAAGATGAATCATTCCCATTGTATGGTCATCTGGTGACAAGAAACACCGACACCAGCAGCGTGAAGAGGATTTACTATGTTTCAAAATCTGTTAAGGAAGTTCTTCAGCTGAATTTCGCAGTCGGACAGCAGCTTAAGATTGCTTCTGTTGGCCTCAAGATGTTTGAGAGACAATCTGCAAAAGAAGGTTCAAGCAAGCCGTGCTCATTCCGTATATCAGCGGAGGGACTACCTGTGATCCTTCCATACATCACCAAACAAGTTCTCTACACTCCAATGGCAGACTTCAAACATCTTCTTGAACACAAATCGATCAGGTTTCCGGATTTTGTCAATCCACAGTTGAGTCAGAAAGCAACTGAACTTGTTTTGGGATGCTGTGTGGTGATTCTCAGCGACGGTGAAGAACCTGTGAAAGCAGATGCATCTACGATTGCTATCAGTTGCTGGAGAGGGAATAATAGTTTGGCTGTTATGATCACTCTTGCGGATTGCCAGGAGCTGCTAGAGAGACTTGCTGAGAGAACACCAAAAACAGGTGGTGGTTCCGTTGATGGGAACAACGGCGATTCAGTAGCTATGGAGACAGCTTAA
Protein:  
MGRGRQRGRSQRKHFKESRENVWKRPKSDAPDKPTWEPFLTDNPNFEEYYKEQGIVKAEEWDLFMEILRKPLPAAFRVNSNSQFCDEIISILENDFVKSLQAEAIEGGELEAIKPLPWYPKNLAWHSNFSRKEIRKNKILERFHEFLKLENEVGNMTRQEAVSMVPPLFLDVHPDHFVLDMCAAPGSKTFQLLEIIHGASEPGTLPNGMVVANDVDFQRSNLLIHQTKRMCTANLIVTNHEGQQFPGCRLKGLSEDMPINQLSFDRVLCDVPCSGDGTLRKAPDIWRKWNSGMGNGLHSLQVILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDSVELVDVSDKLPELIRRPGLKTWKVRDKGGWFTSYKDVPQNRRGGVIVSMFPSGKNLKDSTETTQENENGGVQDECKETENSVVDAIPDEPVVEVSDLPLERCMRIVPHDQNTGAFFIAVLHKVSPLPEFQEKPNPRKHSSKKNADSTEKSPAEEAVVSANTEPVEEEDANNEKDDDSLEPEKQTTQGETTITEEKEANPPSQAGGKRKVPMQGRWKGFDPVVFLKEETLIDSIKEFYGIKDESFPLYGHLVTRNTDTSSVKRIYYVSKSVKEVLQLNFAVGQQLKIASVGLKMFERQSAKEGSSKPCSFRISAEGLPVILPYITKQVLYTPMADFKHLLEHKSIRFPDFVNPQLSQKATELVLGCCVVILSDGEEPVKADASTIAISCWRGNNSLAVMITLADCQELLERLAERTPKTGGGSVDGNNGDSVAMETA